miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|124680258|gb|EH774998.1|EH774998 GGCGGGGGATCGATTGGATTCATTGGATGACAATAGACGACCTAATTGCCACAATTCCACTTTCTCAATAACAATAATTT
TCAGATGAAACTTTCATCTCTCAACTGCTGCTGTTCTTCTTCCTCAATTTCCAGATTTATTTCATCATCATCATCGTCAT
CATCGTTATGTATACTGCTAATCTTCTAGGTTTTGGTCTTGCCGTCTCTTCCAGTGCATTCATCGGATCAAGCTTCATCA
TTAAAAAGAAAGGTCTCCAAAGGGCTGGTGCTTCTGGTACTCGTGCCAGCTCAGGAGGATATGGTTATCTGCTAGAGCCA
CTGTGGTGGATTGGCATGTTGACTATGGTTGTTGGAGAATTTGCGAATTTTGTAGCTTACATCTATGCTCCGGCTGTGCT
TGTGACTCCCCTTGGAGCATTGAGTATTATTGTAAGTGCGGTTCTAGCACATTTCTTACTGAACGAGGAATTGCGGAGAA
TGGGAATACTAGGTTGTGTGCTTTGTATAGTGGGTTCCACCATCATAGTGCTTCATGCCCCTGGTGAACATAGCATAAGC
TCTGTGGAAGAGATTTGGGACTTGGCAACACAACCAGCTTTTCTTTTGTATACAGCTTCAGCAATAGCTGTGGTCCTGGC
ATTGGTGTTGTACTGTGAACCACGCTATGGGCAGAGTAATATGATGGTGTATATTGGCGTATGTTCGATAAATGGTTCAT
TGACGGTTATGAGCGTCAAAGCAATAGGTATCGCCATAAAACTTACATTAGAGGGTTCAAGCCAGGTGG




Most similar to sp|Q5RDB8|NIPA3_PONAB

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5RDB8|NIPA3_PONAB Magnesium transporter NIPA3 OS=Pongo abelii
           GN=NIPAL1 PE=2 SV=1
          Length = 410

 Score =  150 bits (380), Expect = 7e-36
 Identities = 72/155 (46%), Positives = 104/155 (67%)
 Frame = +3

Query: 309 LLEPLWWIGMLTMVVGEFANFVAYIYAPAVLVTPLGALSIIVSAVLAHFLLNEELRRMGI 488
           L E LWW+G+L+M VGE ANF AY +APA LVTPLGALS+++SA+L+ + LNE L   G 
Sbjct: 112 LKEWLWWVGLLSMGVGEAANFAAYAFAPATLVTPLGALSVLISAILSSYFLNEHLNIHGK 171

Query: 489 LGCVLCIVGSTIIVLHAPGEHSISSVEEIWDLATQPAFLLYTASXXXXXXXXXXYCEPRY 668
           +GC+L I+GST++V+HAP E  ++S+ E+      P F+ +                P+ 
Sbjct: 172 IGCILSILGSTVMVIHAPQEEEVTSLHEMEMKLRDPGFISFAVIVTVISLVLILIVAPKK 231

Query: 669 GQSNMMVYIGVCSINGSLTVMSVKAIGIAIKLTLE 773
           GQ+N++VYI +CS+ G+ +V SVK +GIAIK  +E
Sbjct: 232 GQTNILVYISICSLIGAFSVSSVKGLGIAIKELIE 266